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Postings Seeking Core Lab Services & Offering Limited Time Special Services


Service Offered

Offered

Admera Health LLC

custom-services@admerahealth.com

RNA Sequencing

RNA sequencing • Service description: Transcriptome profiling with RNA-Seq is a powerful tool for analyzing gene expression levels within an individual sample, as well as for comparing differential gene expression between multiple samples. Additionally, RNA-Seq is capable of detectingthe presence of novel isoforms, alternatively spliced transcripts; Potential gene fusion events can also be detected through analysis of RNA-seq data. • Advantages: a) Complete solution from RNA extraction to BI analysis b) Variable sample type: mRNA, Whole transcriptome, Targeted, miRNA, Low Input, Ribosomal profiling c) Ability to detect transcripts with low expression levels d) Custom targeted RNA-Seq service available. Please inquire with a list of targets of interest e) Low cost and fast TAT • Service grade: Research Use Only (RUO) in a CLIA environment • Deliverables: a) Raw data as FASTQ files b) Quality control result c) Gene expression analysis (FPKM in both gene and transcript levels) d) Alternative splicing/novel isoform analysis e) List of potential gene fusion events if detected. • TAT: 2 weeks • Sample requirements (extra QC may needed) a) Extracted RNA b) Fresh frozen tissue or cell pellet c) FFPE tissue on slides • Sequencing platforms and price upon to request:High depth of coverage and long reads available, please inquire for details. • Library preparation options and price* a) NEBNext® Ultra™ RNA Library Prep Kit for Illumina b) NEBNext® Ultra™ Directional RNA Library Prep Kit c) TruSeq Small RNA Library Preparation Kits d) ArcherDx Fusionplex Special library prep method upon to request • Basic data analysisis included during promotional period as follows:Read mapping (Tophat) and Gene expression quantification (Cufflinks /FPKM) for human,Single Nucleotide Variation discovery, Fusion Gene Detection * Additional charge may apply for special requirement • Data security: biometrically restricted laboratory access and closed loop data behind firewall and data room also biometrically restricted. 1 year FREE storage of raw data Promotion period: February 1, 2016 to May 31, 2016

Computational - Bioinformatics
Nucleic Acid Extraction
RNA analysis
Sequencing - Next Generation Sequencing (NGS)

05/25/2016


Service Offered

Offered

Admera Health LLC

custom-services@admerahealth.com

Whole exome sequencing

Whole exome sequencing • Service description: Whole Exome Sequencing (WES) is aimed to sequence all the protein-coding regions or exons in a genome, collectively known as exome. There are approximately 180,000 exons which represent less than 2% of the human genome. As most of the disease-related variants are located in the exons, WES is thought to be an efficient way to understand the genetic cause of diseases or conditions. We provide a very cost-effective, high quality WES service. • Advantages: a) Low cost b) High coverage depth and uniformity c) Short TAT • Service grade: Research Use Only (RUO) in a CLIA environment • Genes/regions covered: Human exons in approximately 22,000 genes. • Deliverables: a) FASTQ, BAM and VCF files b) Variant annotation • Sequencing depth: a) Mean depth of coverage: ≥ 100x b) 90% of exons covered at ≥ 20x depth Higher depth of coverage available for additional charges, please inquire for details. • TAT: 3 weeks • Sample requirements: Types of samples accepted: a) Saliva (please request sample collection supplies) b) 5 ml Blood in a EDTA-coated tube c) High quality genomic human DNA: a minimum of 2.0 microgram as quantified by Qubit 2.0 Purity of genomic human DNA samples: a) OD260/280 ratio is between 1.8 to 2.0 b) OD260/230 ratio is between 1.5 to 2.0 • Sequencing platforms: a) Illumina NextSeq paired-end 2x150 bp reads b) Illumina HiSeq paired-end 2x150 bp reads • Library preparation options: a) xGen® Exome Research Panel v1.0* b) TruSeq Exome Library Prep kit* c) Nextera® Rapid Capture Expanded Exome Kit (additional charges apply, please inquire for details) *UTR regions not covered with these options. • Data security: biometrically restricted laboratory access and closed loop data behind firewall and data room also biometrically restricted • Promotion period: February 1, 2016 to May 31, 2016, minimum sample amount: 5

Computational - Bioinformatics
DNA Analysis
Sequencing - DNA Sequencing
Sequencing - Next Generation Sequencing (NGS)

05/25/2016


Service Offered

Offered

Admera Health LLC

custom-services@admerahealth.com

Admera Health LLC Services

Admera Health is an advanced molecular diagnostics company focused on personalized medicine and non-invasive cancer testing. Dedicated to developing cutting-edge diagnostics that span the continuum of care, Admera Health will fulfill unmet medical needs with cost-effective tests and accurate analysis to guide patient care. Utilizing next generation sequencing technologies and advanced bioinformatics, Admera Health seeks to redefine disease screening, diagnosis, treatment, monitoring, and management through its innovative, personalized solutions. It is our mission to deliver transformative, valuable solutions for patients, physicians, payers, and clinical researchers. We are committed to improving the health and well-being of our global community through the direct delivery of personalized, medically actionable results. Admera Health operates a CLIA-certified and CAP-accredited laboratory for the development, validation, and delivery of proprietary laboratory developed tests (LDTs), including CLIA certified services including PGxOne™, OncoGxOne™, OncoGxSelect™, CardioGxOne™ tests, as well as RUO (Research Use Only) services including whole exome sequencing, OncoGxOne™ Plus, OncoGxCustom™, liquid biopsy based BEST™ test, iBRCA™ breast cancer risk test, FloraCheck™ metagenomic test, targeted RNA-Seq and non-invasive companion biomarker development. We are committed to maintaining compliance with all clinical regulations, and to upholding the highest quality standards. We offer the following services: Sample collection and preservation, customized gene panels, whole exome sequencing, 16S rRNA sequencing, HLA typing, clinical biomarkers, aptamer selection service, aptamer synthesis and modification, RNA sequencing, comprehensive cancer panel, lung cancer, breast cancer panel, and biomarker clinical validations. Please inquire via email for more information including pricing.

Computational - Bioinformatics
Computational - Biostatistics
Copy Number Variation (CNV)
Data Analysis
DNA Analysis
Genomics
Genotyping
In Situ Hybridization
Library Services
Molecular Library Services
Nucleic Acid Extraction
Protocol Development/Clinical Trial Coordination
Real-time qPCR
RNA analysis
RNA Integrity
Sequencing - Capillary Sequencing
Sequencing - DNA Sequencing
Sequencing - Next Generation Sequencing (NGS)

05/25/2016


Service Offered

Offered

Jon Ryan

jon.ryan@cosmosid.com

Metagenomic Analysis by CosmosID

Whole genome analysis of shotgun DNA sequencing

Sequencing - Next Generation Sequencing (NGS)

05/17/2016



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Associations :

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  • 2D Spectra Acquisition and Interpretation
  • 2D-PAGE
  • Amino Acid Analysis
  • Animal Husbandry
  • Assays and Measurements
  • Assisted Reproductive Technologies (Rodent IVF, ICSI)
  • Atom Probe Tomography
  • Atomic Force Spectroscopy
  • Behavioral Phenotyping
  • BioBanking
  • Biochemical Analysis
  • Bioethics Consultation Support
  • Cell Culture
  • Cell Imaging
  • Cell Sorting
  • Clinical Assessment (Hematology, Clinical Chemistries, etc.)
  • Clinical Imaging - Small Animal (X-ray, Ultrasound, microCAT, MRI)
  • Computational - Application Development
  • Computational - Bioinformatics
  • Computational - Biostatistics
  • Computational - High Performance Computing
  • Confocal Microscopy
  • Copy Number Variation (CNV)
  • Cryo-Electron Microscopy
  • Cytogenetics
  • Data Analysis
  • DNA Analysis
  • Electron Microscopy
  • Electrophysiology Services
  • Embryo Cryopreservation & Recovery Services
  • F.I.S.H.
  • Fabrication
  • Flow Cytometric Analysis
  • Functional Brain Imaging
  • Gel Chromatography
  • Genomics
  • Genotyping
  • Histology
  • Human Pathology Services - Diagnostics & Consultation
  • Immunohistochemistry
  • In Situ Hybridization
  • Laser Capture Microdissection
  • Library Services
  • Light Scattering
  • Magnetic Resonance Imaging (MRI)
  • Mass Spectrometry
  • Microarray
  • Microscopy
  • Molecular Construct Services
  • Molecular Imaging
  • Molecular Library Services
  • Monoclonal Antibody
  • Multiphoton Microscopy
  • Necropsy
  • Nuclear Magnetic Resonance (NMR)
  • Nucleic Acid Extraction
  • oligo synthesis
  • Optical Imaging
  • Outreach
  • PCR Arrays
  • Peptide Synthesis
  • Phosphor Imaging
  • Photolithography
  • Protein Extraction/Purification
  • Proteomics
  • Protocol Development/Clinical Trial Coordination
  • Real-time qPCR
  • Rheology
  • RNA analysis
  • RNA Integrity
  • SDS-PAGE
  • Sequencing - Capillary Sequencing
  • Sequencing - DNA Sequencing
  • Sequencing - Next Generation Sequencing (NGS)
  • Sequencing - Protein Sequencing
  • Sequencing - Pyrosequencing
  • Single Crystal X-ray Pattern Analysis
  • Small-Angle Neutron Scattering
  • Spectroscopy
  • Stem Cell Procurement
  • Support Services - Audiovisual Support
  • Support Services - Biological photography/Photomicrography
  • Support Services - Central Laboratory Supply
  • Support Services - Electronics & Fabrication Shop
  • Support Services - Glass Washing/Autoclaving
  • Support Services - Glassblowing
  • Support Services - Graphic Services
  • Support Services - Media Preparation
  • Support Services - Print Shop/Document Center
  • Support Services - Shared Instrumentation Oversight & Maintenance
  • Surface Plasmon Resonance (SPR)
  • Surgical Services
  • Thermal Analysis
  • Tissue Culture
  • Transgenics
  • Ultrasonic Imaging
  • Veterinary Services
  • Viral Vectors
  • Virology
  • Western Blot
  • X-Ray Crystallography
  • X-ray Diffraction and Scattering
  • Xenograft / Xenotransplantation


 

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  • 2D Spectra Acquisition and Interpretation
  • 2D-PAGE
  • Amino Acid Analysis
  • Animal Husbandry
  • Assays and Measurements
  • Assisted Reproductive Technologies (Rodent IVF, ICSI)
  • Atom Probe Tomography
  • Atomic Force Spectroscopy
  • Behavioral Phenotyping
  • BioBanking
  • Biochemical Analysis
  • Bioethics Consultation Support
  • Cell Culture
  • Cell Imaging
  • Cell Sorting
  • Clinical Assessment (Hematology, Clinical Chemistries, etc.)
  • Clinical Imaging - Small Animal (X-ray, Ultrasound, microCAT, MRI)
  • Computational - Application Development
  • Computational - Bioinformatics
  • Computational - Biostatistics
  • Computational - High Performance Computing
  • Confocal Microscopy
  • Copy Number Variation (CNV)
  • Cryo-Electron Microscopy
  • Cytogenetics
  • Data Analysis
  • DNA Analysis
  • Electron Microscopy
  • Electrophysiology Services
  • Embryo Cryopreservation & Recovery Services
  • F.I.S.H.
  • Fabrication
  • Flow Cytometric Analysis
  • Functional Brain Imaging
  • Gel Chromatography
  • Genomics
  • Genotyping
  • Histology
  • Human Pathology Services - Diagnostics & Consultation
  • Immunohistochemistry
  • In Situ Hybridization
  • Laser Capture Microdissection
  • Library Services
  • Light Scattering
  • Magnetic Resonance Imaging (MRI)
  • Mass Spectrometry
  • Microarray
  • Microscopy
  • Molecular Construct Services
  • Molecular Imaging
  • Molecular Library Services
  • Monoclonal Antibody
  • Multiphoton Microscopy
  • Necropsy
  • Nuclear Magnetic Resonance (NMR)
  • Nucleic Acid Extraction
  • oligo synthesis
  • Optical Imaging
  • Outreach
  • PCR Arrays
  • Peptide Synthesis
  • Phosphor Imaging
  • Photolithography
  • Protein Extraction/Purification
  • Proteomics
  • Protocol Development/Clinical Trial Coordination
  • Real-time qPCR
  • Rheology
  • RNA analysis
  • RNA Integrity
  • SDS-PAGE
  • Sequencing - Capillary Sequencing
  • Sequencing - DNA Sequencing
  • Sequencing - Next Generation Sequencing (NGS)
  • Sequencing - Protein Sequencing
  • Sequencing - Pyrosequencing
  • Single Crystal X-ray Pattern Analysis
  • Small-Angle Neutron Scattering
  • Spectroscopy
  • Stem Cell Procurement
  • Support Services - Audiovisual Support
  • Support Services - Biological photography/Photomicrography
  • Support Services - Central Laboratory Supply
  • Support Services - Electronics & Fabrication Shop
  • Support Services - Glass Washing/Autoclaving
  • Support Services - Glassblowing
  • Support Services - Graphic Services
  • Support Services - Media Preparation
  • Support Services - Print Shop/Document Center
  • Support Services - Shared Instrumentation Oversight & Maintenance
  • Surface Plasmon Resonance (SPR)
  • Surgical Services
  • Thermal Analysis
  • Tissue Culture
  • Transgenics
  • Ultrasonic Imaging
  • Veterinary Services
  • Viral Vectors
  • Virology
  • Western Blot
  • X-Ray Crystallography
  • X-ray Diffraction and Scattering
  • Xenograft / Xenotransplantation

A joint venture with:

Contact Information:

Vermont Genetics Network
University of Vermont
120A Marsh Life Science Building
Burlington, VT 05405-0086
(802) 656-9119
(802) 656-2914 - FAX
vgn@uvm.edu

Contact the Webmaster:
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